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Table 9 Comparison of ChapterDX HPV-STI NGS and Roche cobas for samples with combined HPV and STI co-infection

From: A comprehensive HPV-STI NGS assay for detection of 29 HPV types and 14 non-HPV sexually transmitted infections

Sample

Roche Cobas

Chapter diagnostics HPV-STI NGS panel

1

HPV16 and others

HPV16, 35, Trichomonas vaginalis, Mycoplasma hominis

2

Others

HPV33, 56, 43, Trichomonas vaginalis, Mycoplasma hominis

3

HPV16, 18, others

HPV16, 18, 31, 33, 45, 52, 56, 68a, 42, 61 Trichomonas vaginalis, Mycoplasma hominis

4

Others

HPV58 and Chlamydia Trachomatis

5

Others

HPV16, 39, and Herpes Simplex II (HSV2)

6

Others

HPV66, 68a and Chlamydia Trachomatis

7

Others

HPV31, 51, Mycoplasma genitalium, Trichomonas vaginalis, Mycoplasma hominis, Ureaplasma Parvum

8

HPV16 and others

HPV16, 45, 11, 81, 83, Herpes Simplex II (HSV2), Mycoplasma hominis,Trichomonas vaginalis

9

Others

HPV58, 42, Chlamydia trachomatis