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Table 2 The sequence of primers used for amplification of CTNNB1 gene, HBsAg coding region and gene expression analysis

From: Investigation of CTNNB1 gene mutations and expression in hepatocellular carcinoma and cirrhosis in association with hepatitis B virus infection

Gene

Forward

5′- 3′

Revers

5′- 3′

PCR size

Taa

Ref

β-catenin

CGTGGACAATGGCTACTCAA

CACTCAGAGAAGGAGCTGTGG

150

57

b

c-Myc

GGACGACGAGACCTTCATCAA

CCAGCTTCTCTGAGACGAGCTT

92

60

[10]

HMBS

CCCTGCCAGAGAAGAGTGTG

GTGTTGAGGTTTCCCCGAAT

109

57

b

GAPDH

CGACCACTTTGTCAAGCTCA

AGGGGTCTACATGGCAACTG

228

58

[17]

HBS1

GAGTCTAGACTCGTGGTGGACTTC

AAATKGCACTAGTAAACTGAGCCA

448

58

[18]

HBS2

CGTGGTGGACTTCTCTCA ATTTTC

GCCARGAGAAACGGRCTGAGGCCC

417

60

[18]

CTNNB1 ex3–5

TAGCTGATTTGATGGAGTTGG

CTCACGATGATGGGAAAGGT

994

57

b

CTNNB1 ex3, outer

TGCTTTTCTTGGCTGTCTTTC

CCTAAATGGTAAAAGTGACATTGC

500

55

b

CTNNB1 ex3, inner

TGCTAATACTGTTTCGTATTTATAGC

TTCTGACTTTCAGTAAGGCAATG

293

53

b

  1. aTa is the temperature of annealing for each primer set
  2. bThese primers were designed in current study