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Table 1 Primers for HPV16 detection, amplification and sequencing

From: Variants of human papillomaviruses 16 (HPV16) in Uigur women in Xinjiang, China

  Primer name Primer sequence Gene area covered (bp)
HPV16 detection pHPV16 E6-F 5′-GACCCAGAAAGTTACCACAG-3′ 146-374
  pHPV16 E6-R 5′-CACAACGGTTTGTTGTATTG-3′  
E6/E7 16E6-15 N 5′-AAACTAAGGGCGTAACCGAAATC-3′ 44-910
  16E7-16C 5′-CAGCCTCTACATAAAACCATCCAT-3′  
  16E6-13 N 5′-AACCGAAATCGGTTGAACCG-3′ 60-857
  16E7-13C 5′-TGCAGGATCAGCCATGGTAGAT-3′  
  MY11-N 5′-GCMCAGGGWCATAAYAATGG-3′ 6602-7013
L1 MY09-C 5′-CGTCCMARRGGAWACTGATC-3′  
  GP-N 5′-CTGTGGTWGATACYACWCGCAGTAC-3′ 6656-7013
  1. F forward primer, R reverse primer, N normal strand, C complementary strand. Degenerate primers used : M = A/C; R = A/G; W = A/T; Y = C/T