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Table 3 Prediction of N-glycosylation sites

From: Genetic diversity and bioinformatic analysis in the L1 gene of HPV genotypes 31, 33, and 58 circulating in women with normal cervical cytology

Seq. name

Position

Potential*

N-Glycosylation result**

P26535 (HPV-58)

242 NKSD

0.6964

++

252 NSTC

0.4706

−

367 NMTL

0.5768

+

P06416 (HPV-33)

54 NPTN†

0.6644

++

216 NKSD

0.6962

++

341 NMTL

0.5742

+

P17388 (HPV-31)

263 NRSG

0.5888

+

289 NSTY

0.6082

+

342 NMSV

0.5354

+

  1. *The potential scores indicate the averaged output of neural networks
  2. **Within the protein sequences, the position with possible crossing the threshold of 0.5 is predicted N-glycosylated, while the positions with below the cutoff are predicted as negative sites
  3. †N-link glycosylated asparagine within Asn-Pro-Ser/Thr sequon