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Table 1 Primer and probes for real time polymerase chain reaction

From: Human papillomavirus infection in anal intraepithelial lesions from HIV infected Cuban men

LCR/E6/E7 regions primers and TaqMan probes Sequences 5′- 3′
HPV 16 + 5′ gaa ccg aaa ccg gtt agt ata a 3′
HPV 16 - 5′ atg tat agt tgt ttg cag ctc tgt 3′
HPV 16 Probe 5′ cat ttt atg cac caa aag aga act gca atg ttt c 3′
HPV 18 + 5′ gga ccg aaa acg gtg tat ata a 3′
HPV 18 - 5′ cag tga agt gtt cag ttc ggt 3′
HPV 18 Probe 5′ atg tga gaa aca cac cac aat act atg gcg cg 3′
HPV 31 + 5′ gaa ccg aaa acg gtt ggt ata ta 3′
HPV 31 - 5′ atc gta ggg tat ttc caa tgc 3′
HPV 31 Probe 5′ cat agt att ttg tgc aaa cct aca gac gcc atg t 3′
HPV 33 + 5′ gca tga ttt gtg cca agc at 3′
HPV 33 - 5′ ctc aga tcg ttg caa agg ttt 3′
HPV 33 Probe 5′ act ata cac aac att gaa cta cag tgc gtg gaa tgc 3′
HPV 45 + 5′ cag tgt aat aca tgt tgt gac cag 3′
HPV 45 - 5′ aca gga tct aat tca ttc tga ggt 3′
HPV 45 Probe 5′ caa gaa aga ctt cgc aga cgt agg gaa aca c 3′
HPV 58 + 5′ cac gga cat tgc atg att tgt 3′
HPV 58 - 5′ tca gat cgc tgc aaa gtc ttt 3′
HPV 58 Probe 5′ ttt caa ttc gat ttc atg cac 3′
β globin + 5′ aca caa ctg tgt tca cta gc 3′
β globin - 5′ caa ctt cat cca cgt tca cc 3′
β globin Probe 5′ tca aac aga cac cat ggt gca tct gac tcc 3′