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Table 2 ddPCR assay primers and probes

From: Human herpesvirus multiplex ddPCR detection in brain tissue from low- and high-grade astrocytoma cases and controls

 

Forward primer (5′-3′)

Reverse primer (5′-3′)

Probe

HHV-6A u57

CCGTGGGATCGTCTAAAATTATAGATGT

CCACACTAGTCCGGACGGATAA

FAM –

CTGGAACTGTATAATAGG

– MGBNFQ

HHV-6B u57

CCGTGGGATCGTCTAAAATTATAGATGT

CCACACTAGTCCGGACGGATAA

VIC –

CTGGAGCTGTACAACAG

– MGBNFQ

CMV ul55

TGGGCGAGGACAACGAA

TGAGGCTGGGAAGCTGACAT

FAM –

TGGGCAACCACCGCACTGAGG

– 3BHQ

EBV lmp1

AAGGTCAAAGAACAAGGCCAAG

GCATCGGAGTCGGTGG

FAM –

AGCGTGTCCCCGTGGAGG

– MGBNFQ

RPP30 a

GATTTGGACCTGCGAGCG

GCGGCTGTCTCCACAAGT

VIC –

CTGACCTGAAGGCTCT

– MGBNFQ

  1. a Ribonuclease P protein subunit p30