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Table 3 Primer sequences for MSP

From: HIV-1 Tat induces DNMT over-expression through microRNA dysregulation in HIV-related non Hodgkin lymphomas

Gene

Primer sequence

INK4/p16 U FORWARD

5’-TTA TTA GAG GGT GGG GTG GAT TGT-3’

INK4/p16 U REVERSE

5’-CAA CCC CAA ACC ACA ACC ATA A-3’

INK4/p16 M FORWARD

5’-TTA TTA GAG GGT GGG GCG GAT CGC-3’

INK4/p16 M REVERSE

5’-GAC CCC GAA CCG CGA CCG TAA-3’

TP53 U FORWARD

5’-TTT TTT AGG TAG TTT TTG GTT TTG T-3’

TP53 U REVERSE

5’-ACC AAA CCT CTC AAA TTA CAA CAA T-3’

TP53 M FORWARD

5’-ATT TTT TTA GGT AGT TTT CGG TTT C-3’

TP53 M REVERSE

5’-GAA CCT CTC AAA TTA CGA CGA T-3’

  1. Primers for INK4/p16 unmethylated (U) amplified a region of 151 bp, primers for INK4/p16 methyled (M) amplified a region of 150 bp; primers for TP53 unmethylated amplified a region of 134 bp, primers for TP53 methylated amplified a region of 133 bp.