Table 2 List of penile cancer samples analysed for exon’s deletions
From: Somatic mutations of STK11 gene in human papillomavirus positive and negative penile cancer
Sample | HPV | Exon 1 copy number | Exon 7 copy number | Exon 1/Exon 7 ratio | Change of exon 1 copy number | Origin |
|---|---|---|---|---|---|---|
PC04 | HPV16 | 3.0 × 104 | 3.1 × 104 | 1 | no change | Uganda |
PC07 | HPV16 | 3.6 × 104 | 3.5 × 104 | 1 | no change | Uganda |
PC08 | HPV16 | 2.1 × 103 | 2.2 × 103 | 1 | no change | Uganda |
PC15 | HPV16 | 4.0 × 104 | 4.2 × 104 | 1 | no change | Uganda |
PC17 | HPV16 | 2.8 × 103 | 2.7 × 103 | 1 | no change | Uganda |
PC23 | HPV16 | 4.0 × 103 | 3.8 × 103 | 1.1 | no change | Uganda |
PC30 | HPV16 | 480 | 457 | 1.1 | no change | Italy |
PC31 | Negative | 648 | 651 | 1 | no change | Italy |
PC32 | HPV16 | 787 | 840 | 0.9 | no change | Italy |
PC33 | Negative | 637 | 765 | 0.8 | no change | Italy |
PC34 | Negative | 838 | 943 | 0.9 | no change | Italy |
PC35 | HPV 18 | 487 | 847 | 0.5 | heterozygous deletion | Italy |
PC36 | HPV16 | 950 | 975 | 1 | no change | Italy |
PC37 | HPV16 | 655 | 645 | 1 | no change | Italy |
PC38 | HPV16 | 780 | 795 | 1 | no change | Italy |
PC79 | HPV16 | 501 | 495 | 1 | no change | Italy |
PC80 | Negative | 457 | 432 | 1.1 | no change | Italy |
PC81 | Negative | 380 | 347 | 1.1 | no change | Italy |
PC82 | Negative | 468 | 310 | 1.4 | no change | Italy |
PC84 | Negative | 930 | 971 | 1 | no change | Italy |
PC85 | HPV56/54 | 172 | 316 | 0.5 | heterozygous deletion | Italy |
PC90 | Negative | 215 | 475 | 0.4 | heterozygous deletion | Italy |
PC91 | Negative | 697 | 846 | 0.8 | no change | Italy |
PC92 | Negative | 461 | 553 | 0.8 | no change | Italy |
PC93 | Negative | 738 | 643 | 1.1 | no change | Italy |
PC94 | Negative | 806 | 780 | 1 | no change | Italy |