Infectious Agents and Cancer

Table 3 Novel polymorphisms identified

From: Human papillomavirus type 16 variants in cervical intraepithelial neoplasia and invasive carcinoma in San Luis Potosí City, Mexico

HPV16		Nucleotide change		Amino acid change
Subtype	Variant	Type ^a	Location ^b	Substitution	Frameshift
AA	AA-a	D	484	---	127
E	350G	S	A182T	I27L	---
	350G	D	393	---	97
	350G	S	C206T	Q35stop	---
	350G	S	T351A	L83E	---
	350G	I	T, 206–207	---	35
	G188C	S	A97G	---	---
	E-P	S	A404T	I101F	---
	E-P	S	C374A	Q91K	---
	E-P	D	533	---	144
	E-P	I	G, 505–506	---	135
	E-P	S	C173A	H24N	---
	E-P	S	A330G	---	---
	E-P	S	T331A	---	---
	E-P	I	TG, 331–332	---	76
	E-P	S	A354G	---	---
	E-P	S	C360G	---	---
	E-P	S	A361G	---	---
	E-P	S	A91C	Q-H	---
	E-P	I	C, 121–122	---	6
	E-P	I	C, 122–123	---	6

^a D, deletion. I, insertion. S, substitution.
^b Nucleotide numbering of the HPV16 E-P Ref genome.

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