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Table 2 Clinical symptoms, CT findings, laboratory test results and microbial detection results of patients at the time of IP diagnosis

From: Pneumocystis jirovecii with high probability detected in bronchoalveolar lavage fluid of chemotherapy-related interstitial pneumonia in patients with lymphoma using metagenomic next-generation sequencing technology

Patient ID

Symptoms

CT findings

Neutrophil count (*109/L)

CRP

(mg/L)

BDG and GM assays

Routine laboratory staining and cultures

mNGS outcome

Course of prednisone

≥ 20 mg/d

Antimicrobial therapy

Recovery time

P1

Fever

Dyspnea

Diffuse GGO

10

98

Negative

Negative

Pneumocystis jirovecii

5 days

TMP-SMX, moxifloxacin

5 days

P2

Fever

Dyspnea

Diffuse GGO

8.3

39.3

Negative

Negative

Campylobacter mucosa

Pneumocystis jirovecii

No glucocorticoids were used

TMP-SMX, piperacillin-tazobactam, imipenem/cilastatin

5 days

P3

Fever

Diffuse GGO

0.6

83

Negative

Negative

Pseudostreptococcus pneumoniae

EBV

Pneumocystis jirovecii

No glucocorticoids were used

TMP-SMX, piperacillin-tazobactam

20 days

P4

Fever

Dyspnea

Diffuse patchy exudation

13.3

62

Negative

Klebsiella pneumoniae

EBV

Candida albicans

3 months

Caspofungin, linezolid, imipenem/cilastatin

3.5 months

P5

Fever Dyspnea

Diffuse GGO

2.2

10.6

Positive BDG assay (361.9 pg/mL)

Negative

CMV

Pneumocystis jirovecii

3 months

TMP-SMX, caspofungin, moxifloxacin, voriconazole

1 year

P6

Fever

Dyspnea

Diffuse patchy exudation

0.6

61

Negative

Negative

CMV

Pneumocystis jirovecii

14 days

TMP-SMX, voriconazole, moxifloxacin, teicoplanin

2 months

P7

Fever

Dyspnea

Diffuse GGO

2.2

14.1

Negative

Negative

Pneumocystis jirovecii

1.5 months

TMP-SMX, caspofungin, voriconazole

5 months

P8

Fever Dyspnea

Diffuse GGO

1.1

277

Positive BDG assay (275.34 pg/mL)

Negative

Pneumocystis jirovecii

1 months

TMP-SMX, caspofungin, piperacillin-tazobactam

1.5 months

P9

Fever

Cough

Dyspnea

Diffuse GGO

2.9

92.4

Negative

Negative

EBV

Pneumocystis jirovecii

3 months

TMP-SMX, caspofungin, piperacillin-tazobactam

4.3 months

P10

No symptom

Diffuse GGO

2.4

25.2

No data

Negative

Negative

5 days

TMP-SMX

9 days

P11

Fever

Dyspnea

Diffuse GGO

20.8

35.8

No data

Negative

Acinetobacter baumannii

Pneumocystis jirovecii

1 month

TMP-SMX, caspofungin, piperacillin-tazobactam

15 days

P12

Fever

Cough

Sputum

Diffuse GGO

3

34

Positive BDG assay (153.72 pg/mL)

Staphylococcus aureus

Pseudomonas aeruginosa

Pneumocystis jirovecii

No glucocorticoids were used

TMP-SMX, piperacillin-tazobactam

30 days

P13

Fever

Diffuse GGO

10

11.8

Negative

Negative

Escherichia coli

Pneumocystis jirovecii

CMV

No glucocorticoids were used

TMP-SMX, caspofungin, piperacillin-tazobactam, ganciclovir

2 months

P14

Fever

Diffuse GGO

8.3

115

Positive BDG assay

(129.14 pg/mL)

Negative

Pneumocystis jirovecii

No glucocorticoids were used

TMP-SMX, piperacillin-tazobactam

15 days

P15

Fever Dyspnea

Diffuse GGO

0.6

60.6

Negative

Negative

CMV

15 days

TMP-SMX, piperacillin-tazobactam, ganciclovir

1 month

  1. CT computed tomography, GGO ground-glass opacities, CRP C-reactive protein, BDG beta-D-glucan, GM galactomannan, mNGS metagenomic next-generation sequencing, CMV Cytomegalovirus, EBV Epstein-Barr virus, TMP-SMX trimethoprim-sulfamethoxazole