Primer sets | Sequence 5-′3′ | Degenerate bases | Tm (°C) | Product size (Kb) | Reference | HPV Types | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |  |  |  |  |  | 16 | 18 | 31 | 33 | 35 | 39 | 45 | 52 | 56 | 58 | 59 |
HRT1 F | GACAGCGGRTATGGCAATWSTGAAG | 3 | 56 | ~1460 | In this study | + | − | + | + | + | − | − | + | − | + | − |
HRT1 R | CCACGTCCTTGAGAAAAAGGATTTCC | 0 | ||||||||||||||
HRT2 F | GAGACACACCWGARTGGATACA | 2 | 56 | ~1200 | In this study | − | + | − | − | − | − | + | − | + | − | − |
HRT1 R | CCATAGTTCCTCGCATGTRTCT | 1 | ||||||||||||||
MY09 | GCMCAGGGWCATAAYAATGG | 3 | 45 | ~450 | [20] | + | + | + | + | − | + | − | − | − | + | + |
MY11 | CGTCCMARRGGAWACTGATC | 4 | ||||||||||||||
GP5 | TTTGTTACTGGTAGATAC | 0 | 40 | ~140 | [21] | − | − | − | − | − | − | − | − | − | − | − |
GP6 | GAAAAATAAACTGTAAATCA | 0 | ||||||||||||||
GP5+ | TTTGTTACTGTGGTAGATACTAC | 0 | 40 | ~145 | [22] | + | + | + | − | − | − | + | − | − | − | − |
GP6+ | GAAAAATAAACTGTAAATCATATTC | 0 | ||||||||||||||
CP65 | CARGGTCAYAAYAATGGYAT | 4 | 55 | ~465 | [23] | x | x | x | x | x | x | x | x | x | x | x |
CP70 | AAYTTTCGTCCYARAGRAWATTGRTC | 7 | ||||||||||||||
CP66 | AATCARMTGTTTRTTACWGT | 4 | 55 | ~385 | [23] | x | x | x | x | x | x | x | x | x | x | x |
CP69 | GWTAGATCWACATYCCARAA | 4 | ||||||||||||||
SPF1 | GCICARGGICAYAAYAATGG | 5 | 45 | ~65 | [24] | x | x | x | x | x | x | x | x | x | x | x |
SPF2 | GTIGTATCIACWACAGTAACAAA | 3 |